| 1. |  | AC Sparta Praha | 1354 | 846 | 281 | 227 | 2623 | 1222 | +1401 | 2801 |
| 2. |  | SK Slavia Praha | 1354 | 825 | 305 | 224 | 2570 | 1103 | +1467 | 2764 |
| 3. |  | FC Viktoria Plzeň | 1234 | 669 | 269 | 296 | 2060 | 1273 | +787 | 2264 |
| 4. |  | FC Slovan Liberec | 1371 | 558 | 366 | 447 | 1854 | 1597 | +257 | 2029 |
| 5. |  | FC Baník Ostrava | 1361 | 513 | 368 | 480 | 1880 | 1712 | +168 | 1893 |
| 6. |  | FK Jablonec | 1324 | 499 | 381 | 444 | 1791 | 1637 | +154 | 1878 |
| 7. |  | SK Sigma Olomouc | 1276 | 463 | 363 | 450 | 1659 | 1579 | +80 | 1738 |
| 8. |  | FK Teplice | 1252 | 418 | 340 | 494 | 1483 | 1701 | -218 | 1594 |
| 9. |  | FK Mladá Boleslav | 1053 | 403 | 266 | 384 | 1571 | 1480 | +91 | 1475 |
| 10. |  | 1.FC Slovácko | 1078 | 386 | 278 | 414 | 1278 | 1395 | -117 | 1436 |
| 11. |  | Bohemians Praha 1905 | 1080 | 319 | 306 | 455 | 1187 | 1535 | -348 | 1255 |
| 12. |  | SK Dynamo České Budějovice | 1056 | 278 | 257 | 521 | 1121 | 1760 | -639 | 1080 |
| 13. |  | FC Zbrojovka Brno | 854 | 271 | 222 | 361 | 995 | 1189 | -194 | 1025 |
| 14. |  | FC Hradec Králové | 816 | 245 | 222 | 349 | 841 | 1096 | -255 | 948 |
| 15. |  | FC Zlín | 888 | 231 | 240 | 417 | 922 | 1363 | -441 | 923 |
| 16. |  | FK VIAGEM Příbram | 770 | 213 | 192 | 365 | 780 | 1168 | -388 | 831 |
| 17. |  | FK Viktoria Žižkov | 420 | 144 | 106 | 170 | 478 | 539 | -61 | 526 |
| 18. |  | MFK Karviná | 554 | 122 | 148 | 284 | 587 | 905 | -318 | 514 |
| 19. |  | FK Pardubice | 434 | 113 | 90 | 231 | 444 | 726 | -282 | 429 |
| 20. |  | Slezský FC Opava | 440 | 105 | 114 | 221 | 427 | 686 | -259 | 429 |
| 21. |  | FK Dukla Praha | 410 | 103 | 112 | 195 | 446 | 649 | -203 | 420 |
| 22. |  | FK Drnovice | 300 | 114 | 67 | 119 | 392 | 398 | -6 | 396 |
| 23. |  | FK Chmel Blšany | 240 | 67 | 63 | 110 | 255 | 350 | -95 | 264 |
| 24. |  | FC Vysočina Jihlava | 210 | 55 | 61 | 94 | 221 | 315 | -94 | 226 |
| 25. |  | SK Kladno | 120 | 28 | 30 | 62 | 99 | 173 | -74 | 114 |
| 26. |  | FC Union Cheb | 90 | 29 | 26 | 35 | 95 | 121 | -26 | 100 |
| 27. |  | FK SIAD Most | 90 | 19 | 30 | 41 | 96 | 140 | -44 | 87 |
| 28. |  | FC Karviná | 60 | 12 | 12 | 36 | 53 | 105 | -52 | 48 |
| 29. |  | FK Bohemians Praha | 60 | 14 | 8 | 38 | 60 | 111 | -51 | 50 |
| 30. |  | 1.SC Znojmo FK | 30 | 6 | 9 | 15 | 32 | 49 | -17 | 27 |
| 31. |  | FK Ústí nad Labem | 30 | 4 | 7 | 19 | 22 | 67 | -45 | 19 |
| 32. |  | FC JOKO Slovácká Slavia Uherské Hradiště | 30 | 3 | 8 | 19 | 19 | 65 | -46 | 17 |
| 33. |  | MFK Vítkovice | 30 | 3 | 7 | 20 | 22 | 64 | -42 | 13 |
| 34. |  | FK ŠVARC Benešov | 30 | 3 | 3 | 24 | 23 | 78 | -55 | 12 |
| 35. |  | AFK Atl. Lázně Bohdaneč | 30 | 2 | 5 | 23 | 18 | 61 | -43 | 11 |
